5XRU
Crystal structure of Notothenia coriiceps adenylate kinase variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-19 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97933 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 105.435, 105.435, 83.753 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.900 |
R-factor | 0.17663 |
Rwork | 0.175 |
R-free | 0.21138 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5x6k |
RMSD bond length | 0.022 |
RMSD bond angle | 2.421 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.090 | 0.781 |
Number of reflections | 37833 | 3703 |
<I/σ(I)> | 24.9 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.1 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 200mM lithium sulfate, 100mM acetate pH4.0, 41% PEG 400 |