5XRT
Crystal structure of A/Minnesota/11/2010 (H3N2) influenza virus hemagglutinin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-10 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.033 |
Spacegroup name | I 21 3 |
Unit cell lengths | 292.782, 292.782, 292.782 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.212 - 3.150 |
R-factor | 0.2013 |
Rwork | 0.199 |
R-free | 0.24570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yp2 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.896 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.212 | 3.200 |
High resolution limit [Å] | 3.150 | 3.150 |
Rmerge | 0.175 | 0.869 |
Rpim | 0.051 | 0.677 |
Number of reflections | 82265 | 4534 |
<I/σ(I)> | 22.4 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 18.9 | 17.2 |
CC(1/2) | 0.582 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.2 M calcium acetate, 18% (w/v) polyethylene glycol PEG 8000, 0.1 M sodium cacodylate (pH 6.5) |