5XNY
Crystal structure of CreD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2016-07-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 76.810, 98.220, 124.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.918 - 2.180 |
R-factor | 0.1851 |
Rwork | 0.183 |
R-free | 0.21470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1re5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.809 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.918 | 2.240 |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.074 | 0.490 |
Rmeas | 0.084 | 0.586 |
Number of reflections | 47180 | 3342 |
<I/σ(I)> | 13.63 | 2.45 |
Completeness [%] | 99.2 | 94.6 |
Redundancy | 4.416 | 3.163 |
CC(1/2) | 0.999 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 293 | 0.1 M Tris-HCl, pH 8.2-8.5 containing 1.8-2.0 M ammonium sulfate |