Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XNY

Crystal structure of CreD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]95
Detector technologyPIXEL
Collection date2016-07-17
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.000
Spacegroup nameI 2 2 2
Unit cell lengths76.810, 98.220, 124.510
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.918 - 2.180
R-factor0.1851
Rwork0.183
R-free0.21470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1re5
RMSD bond length0.007
RMSD bond angle0.809
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.9182.240
High resolution limit [Å]2.1802.180
Rmerge0.0740.490
Rmeas0.0840.586
Number of reflections471803342
<I/σ(I)>13.632.45
Completeness [%]99.294.6
Redundancy4.4163.163
CC(1/2)0.9990.903
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.32930.1 M Tris-HCl, pH 8.2-8.5 containing 1.8-2.0 M ammonium sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon