5XM3
Crystal Structure of Methanol dehydrogenase from Methylophaga aminisulfidivorans
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-11-21 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.00000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 63.926, 109.479, 95.554 |
| Unit cell angles | 90.00, 100.48, 90.00 |
Refinement procedure
| Resolution | 34.724 - 1.701 |
| R-factor | 0.1526 |
| Rwork | 0.151 |
| R-free | 0.18140 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1w6s |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.112 |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.730 |
| High resolution limit [Å] | 1.700 | 1.700 |
| Rmerge | 0.112 | 0.478 |
| Number of reflections | 140904 | 6897 |
| <I/σ(I)> | 24.55 | 2.827 |
| Completeness [%] | 99.7 | 98.7 |
| Redundancy | 5.3 | 3.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1M sodium cacodylate pH 6.5, 0.2M magnesium acetate tetrahydrate, 10%(v/v) PEG 8000 |
