5XHJ
Crystal Structure of P450BM3 with 5-Cyclohexylvaleroyl-L-Tryptophan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.653, 146.779, 63.642 |
Unit cell angles | 90.00, 97.25, 90.00 |
Refinement procedure
Resolution | 19.970 - 2.000 |
R-factor | 0.1794 |
Rwork | 0.178 |
R-free | 0.20590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wsp |
RMSD bond length | 0.008 |
RMSD bond angle | 1.316 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.033 | 0.021 | 0.147 |
Rmeas | 0.038 | 0.025 | 0.174 |
Rpim | 0.020 | 0.013 | 0.092 |
Number of reflections | 69112 | ||
<I/σ(I)> | 15.7 | ||
Completeness [%] | 96.7 | 98.5 | 95.9 |
Redundancy | 3.6 | 3.8 | 3.5 |
CC(1/2) | 0.999 | 0.978 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.95 | 293 | 50mM Tris-HCl (pH 7.95), 0.5% (v/v) dimethyl sulfoxide, 0.1mM 5-Cyclohexylvaleroyl-L-Tryptophan, 130mM MgCl2, 8.5% (w/v) PEG 8000 |