Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XBC

Crystal Structure Basis for PEDV nsp1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2017-01-05
DetectorADSC QUANTUM 315
Wavelength(s)0.97917
Spacegroup nameP 1 21 1
Unit cell lengths34.709, 75.053, 37.363
Unit cell angles90.00, 89.96, 90.00
Refinement procedure
Resolution26.477 - 1.249
R-factor0.1719
Rwork0.171
R-free0.19300
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle0.991
Data scaling softwareHKL-2000
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.53050.0001.290
High resolution limit [Å]1.2502.6901.250
Rmerge0.0500.0330.436
Rmeas0.0570.0380.509
Rpim0.0290.0180.258
Number of reflections52517
<I/σ(I)>13.9
Completeness [%]99.396.299.2
Redundancy3.943.8
CC(1/2)0.9980.875
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52930.1 M Lithium sulfate monohydrate, 0.1 M Sodium citrate tribasic dihydrate pH 5.5, 18% w/v Polyethylene glycol 1,000

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon