5XB8
Crystal structure of dibenzothiophene monooxygenase (TdsC) from Paenibacillus sp. A11-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-13 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 100.970, 100.970, 423.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.109 - 1.795 |
R-factor | 0.1527 |
Rwork | 0.151 |
R-free | 0.17810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nf4 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.831 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.109 | 1.860 |
High resolution limit [Å] | 1.795 | 1.800 |
Number of reflections | 390677 | |
<I/σ(I)> | 20.31 | |
Completeness [%] | 99.8 | |
Redundancy | 14 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 1.3M Ammonium sulfate, 0.1M Tris-HCl, 12% Glycerol |