5X3P
Crystal structure of the UBX domain of human UBXD7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 32.067, 78.038, 44.963 |
Unit cell angles | 90.00, 102.67, 90.00 |
Refinement procedure
Resolution | 38.240 - 1.999 |
R-factor | 0.1769 |
Rwork | 0.174 |
R-free | 0.22620 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.175 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 38.240 |
High resolution limit [Å] | 1.990 |
Rmerge | 0.108 |
Rpim | 0.048 |
Number of reflections | 14643 |
<I/σ(I)> | 16.2 |
Completeness [%] | 99.8 |
Redundancy | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 0.1M Tris pH 8.8, 35% v/v Polyethylene glycol 400, 0.1M LiCl |