5X1U
Structure of the cytosolic domain of DotM derived from Legionella pneumophila
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-12-05 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9796 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 50.529, 72.021, 65.691 |
| Unit cell angles | 90.00, 102.15, 90.00 |
Refinement procedure
| Resolution | 40.736 - 1.800 |
| R-factor | 0.1764 |
| Rwork | 0.176 |
| R-free | 0.19830 |
| Structure solution method | SAD |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.829 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
| High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
| Rmerge | 0.079 | 0.077 | 0.179 |
| Rmeas | 0.088 | 0.084 | 0.213 |
| Rpim | 0.036 | 0.032 | 0.111 |
| Total number of observations | 169586 | ||
| Number of reflections | 70306 | ||
| <I/σ(I)> | 9.1 | ||
| Completeness [%] | 91.0 | 99.4 | 72 |
| Redundancy | 4.3 | 6.2 | 2.6 |
| CC(1/2) | 0.996 | 0.928 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 100mM Tris-HCl (pH8.5), 17%(v/v) PEG3350, 200mM MgCl2 |






