5X11
Crystal structure of Bacillus subtilis PadR in complex with operator DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-12 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.00003 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 341.807, 61.567, 120.553 |
Unit cell angles | 90.00, 107.94, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.650 |
R-factor | 0.23012 |
Rwork | 0.228 |
R-free | 0.26819 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5x12 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.274 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.700 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.064 | 0.521 |
Number of reflections | 69940 | |
<I/σ(I)> | 31.1 | |
Completeness [%] | 99.4 | |
Redundancy | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 1.4 M ammonium sulfate, 0.1 M MES, 0.2 M lithium sulfate |