5WZV
Crystal structure of human secreted phospholipase A2 group IIE with Me-indoxam
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2014-09-30 |
Detector | OXFORD RUBY CCD |
Wavelength(s) | 1.5406 |
Spacegroup name | P 21 2 2 |
Unit cell lengths | 49.076, 61.048, 63.328 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.370 - 2.200 |
R-factor | 0.2097 |
Rwork | 0.208 |
R-free | 0.24040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wzm |
RMSD bond length | 0.012 |
RMSD bond angle | 1.513 |
Data reduction software | CrysalisPro |
Data scaling software | Aimless (0.5.28) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.370 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.129 | 0.674 |
Rmeas | 0.139 | 0.723 |
Rpim | 0.051 | 0.258 |
Total number of observations | 71369 | |
Number of reflections | 10042 | |
<I/σ(I)> | 13.9 | |
Completeness [%] | 99.2 | 99.9 |
Redundancy | 7.1 | 7.6 |
CC(1/2) | 0.997 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 2.2M Sodium chloride, 0.1M BIS-TRIS propane pH 7.0 |