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5WXD

Crystal Structure of HLA-A*2402 in complex with avian influenza A(H7N9) virus-derived peptide H7-25 (data set 1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2015-04-15
DetectorSDMS
Wavelength(s)1.03871
Spacegroup nameP 21 21 21
Unit cell lengths67.470, 78.983, 88.052
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.326 - 3.295
R-factor0.2052
Rwork0.203
R-free0.25400
RMSD bond length0.003
RMSD bond angle0.681
Data reduction softwareCNS
Data scaling softwareCNS
Phasing softwareCNS
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]3.295
Number of reflections7564
<I/σ(I)>12.175
Completeness [%]86.4
Redundancy7.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72910.1 M Imidazole pH 7.0, 12% w/v Polyethylene glycol 20000

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PDB entries from 2024-05-15

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