5WU5
Crystal structure of apo human Tut1, form III
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2015-06-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 173.140, 173.140, 208.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.989 - 3.404 |
R-factor | 0.2162 |
Rwork | 0.214 |
R-free | 0.25820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wu2 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.839 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.490 | |
High resolution limit [Å] | 3.400 | 15.220 | 3.400 |
Rmerge | 0.334 | 0.059 | 1.281 |
Number of reflections | 39562 | ||
<I/σ(I)> | 8.7 | 28.29 | 2.32 |
Completeness [%] | 89.8 | 95.7 | 32.1 |
Redundancy | 13 | ||
CC(1/2) | 0.993 | 0.998 | 0.711 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | Sodium Cacodylate pH 7.0, PEG4000, Tacsimate |