5WNP
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 400.000, 400.000, 173.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.981 - 3.300 |
R-factor | 0.1917 |
Rwork | 0.191 |
R-free | 0.22430 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.002 |
RMSD bond angle | 0.503 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.981 | 29.981 | 2.980 |
High resolution limit [Å] | 2.900 | 12.980 | 2.900 |
Rmerge | 0.830 | 0.068 | |
Rmeas | 0.835 | 0.069 | |
Total number of observations | 23797436 | ||
Number of reflections | 298139 | 3576 | 15653 |
<I/σ(I)> | 7.29 | 58.08 | |
Completeness [%] | 97.6 | 94.9 | 69.8 |
Redundancy | 79.82 | 66.716 | 35.337 |
CC(1/2) | 0.999 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 298 | 17% MPD |