5WJL
Crystal Structure of HLA-A*11:01 with GTS1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.954 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 155.500, 150.198, 105.829 |
Unit cell angles | 90.00, 120.53, 90.00 |
Refinement procedure
Resolution | 46.900 - 3.150 |
R-factor | 0.1798 |
Rwork | 0.177 |
R-free | 0.23070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gso |
RMSD bond length | 0.010 |
RMSD bond angle | 1.240 |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.900 | 49.090 | 3.320 |
High resolution limit [Å] | 3.150 | 9.960 | 3.150 |
Rmerge | 0.099 | 0.019 | 0.823 |
Rmeas | 0.029 | 0.022 | |
Rpim | 0.054 | 0.014 | 0.011 |
Number of reflections | 36207 | ||
<I/σ(I)> | 14.8 | ||
Completeness [%] | 99.9 | 97.3 | 99.9 |
Redundancy | 4.3 | 3.9 | 4.3 |
CC(1/2) | 0.100 | 0.999 | 0.722 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 1.4-1.8M NH4SO4, 0.1M Na-cacodylate pH6.5, 200mM NaCl, 2% Ethylen glycol |