5WIQ
Crystal structure of the segment, GFNGGFG, from the low complexity domain of TDP-43, residues 396-402
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-14 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 |
Unit cell lengths | 4.810, 16.439, 22.672 |
Unit cell angles | 90.63, 96.37, 91.26 |
Refinement procedure
Resolution | 22.530 - 1.250 |
R-factor | 0.1533 |
Rwork | 0.152 |
R-free | 0.16780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5WDB |
RMSD bond length | 0.005 |
RMSD bond angle | 0.692 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 1.290 |
High resolution limit [Å] | 1.250 | 2.690 | 1.250 |
Rmerge | 0.161 | 0.069 | 0.406 |
Total number of observations | 7394 | ||
Number of reflections | 1802 | 166 | |
<I/σ(I)> | 5 | ||
Completeness [%] | 94.4 | 99.5 | 95.4 |
Redundancy | 4.1 | 5.5 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 298 | 100mM sodium acetate pH 4.5, 800mM sodium phosphate monobasic, 1200mM potassium phosphate dibasic |