5WG9
Crystal structure of the influenza virus PA endonuclease (E119D mutant) in complex with inhibitor 9b (SRI-30101)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-20 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 90.612, 90.612, 133.788 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.036 - 2.300 |
R-factor | 0.1997 |
Rwork | 0.198 |
R-free | 0.22070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.819 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.097 | 0.064 | 0.697 |
Rmeas | 0.103 | 0.068 | 0.776 |
Rpim | 0.033 | 0.022 | 0.329 |
Total number of observations | 110842 | ||
Number of reflections | 12715 | ||
<I/σ(I)> | 11.1 | ||
Completeness [%] | 98.9 | 99.3 | 91.6 |
Redundancy | 8.7 | 9.3 | 4.5 |
CC(1/2) | 0.996 | 0.864 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.4 | 291 | 1 M Ammonium sulfate, CAPSO pH 9.4, 50 mM MnCl2, 50 mM MgCl2 |