5WFM
Crystal structure of the influenza virus PA endonuclease (E119D mutant) in complex with inhibitor 10e (SRI-30024)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 90.902, 90.902, 133.737 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.895 - 2.251 |
R-factor | 0.2058 |
Rwork | 0.205 |
R-free | 0.22540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.562 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.330 |
High resolution limit [Å] | 2.250 | 4.850 | 2.250 |
Rmerge | 0.079 | 0.042 | |
Rmeas | 0.083 | 0.044 | |
Rpim | 0.027 | 0.014 | 0.389 |
Number of reflections | 13665 | ||
<I/σ(I)> | 11.3 | ||
Completeness [%] | 99.9 | 99.7 | 99.9 |
Redundancy | 10.7 | 10.2 | 8.9 |
CC(1/2) | 0.999 | 0.831 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.4 | 291 | 1 M Ammonium Sulfate, CAPSO pH 9.4, 50 mM MnCl2, 50 mM MgCl2 |