5WF5
Agonist bound human A2a adenosine receptor with D52N mutation at 2.60 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-28 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.033 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.686, 77.769, 86.488 |
Unit cell angles | 90.00, 101.05, 90.00 |
Refinement procedure
Resolution | 29.909 - 2.600 |
R-factor | 0.2158 |
Rwork | 0.214 |
R-free | 0.25090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB 3EML |
RMSD bond length | 0.003 |
RMSD bond angle | 0.459 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2614: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.800 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.180 | 0.880 |
Number of reflections | 17786 | |
<I/σ(I)> | 8.1 | 1.1 |
Completeness [%] | 92.3 | 69.4 |
Redundancy | 4.4 | 3 |
CC(1/2) | 0.503 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 296 | 100 mM sodium citrate pH 5, 24-27% (v/v) polyethylene glycol (PEG) 400, 30-80 mM MgCl 2 , 5% (v/v) Jeffamine M-600 pH 7 (Hampton) |