5WDR
Choanoflagellate Salpingoeca rosetta Ras with GMP-PNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.115869 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.562, 119.106, 38.570 |
Unit cell angles | 90.00, 117.34, 90.00 |
Refinement procedure
Resolution | 34.261 - 1.600 |
R-factor | 0.231 |
Rwork | 0.229 |
R-free | 0.27980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wds |
RMSD bond length | 0.011 |
RMSD bond angle | 1.234 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.700 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.098 | 0.944 |
Rpim | 0.047 | 0.557 |
Number of reflections | 40589 | 1969 |
<I/σ(I)> | 9.5 | 1.4 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 4.5 | 3.8 |
CC(1/2) | 0.997 | 0.428 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 15 % PEG8000, 100 mM Bis-Tris, pH 5.5, 200 mM magnesium acetate, 50 mM calcium chloride |