5WCX
Streptococcus pyogenes phosphoglycerol transferase GacH in complex with sn-glycerol-1-phosphate, crystal form 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-28 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.970, 77.530, 174.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.431 - 2.000 |
R-factor | 0.1828 |
Rwork | 0.181 |
R-free | 0.21180 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5u9z |
RMSD bond length | 0.003 |
RMSD bond angle | 0.557 |
Data reduction software | XDS (VERSION Nov 1, 2016 BUILT=20161205) |
Data scaling software | XSCALE (VERSION Nov 1, 2016 BUILT=20161205) |
Phasing software | REFMAC (5.8.0158) |
Refinement software | PHENIX (dev_3139) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.431 | 49.431 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.053 | 0.022 | 1.153 |
Rmeas | 0.058 | 0.024 | 1.256 |
Number of reflections | 63957 | 820 | 4637 |
<I/σ(I)> | 18.94 | 54.05 | 1.66 |
Completeness [%] | 99.6 | 98.9 | 99.1 |
Redundancy | 6.573 | 5.85 | 6.397 |
CC(1/2) | 0.999 | 0.999 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 294 | 0.2M CALCIUM ACETATE, 0.1M MES PH 6.0, 20% PEG8000 |