5WBO
Structure of human Ketohexokinase complexed with hits from fragment screening
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 82.980, 85.900, 138.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.140 - 2.250 |
R-factor | 0.201 |
Rwork | 0.200 |
R-free | 0.22290 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 1.120 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | BUSTER |
Refinement software | BUSTER (2.11.5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.143 | 38.143 | 2.370 |
High resolution limit [Å] | 2.251 | 7.120 | 2.250 |
Rmerge | 0.014 | 1.382 | |
Rmeas | 0.074 | 0.015 | 1.495 |
Rpim | 0.028 | 0.006 | 0.565 |
Total number of observations | 317309 | ||
Number of reflections | 47605 | ||
<I/σ(I)> | 19.8 | 45.8 | 0.6 |
Completeness [%] | 99.9 | 99.1 | 100 |
Redundancy | 6.7 | 5.9 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 17% PEG 8k, 0.1M Na-Citrate, 0.2M Ammonium sulfate, pH 4.5 |