5WAN
Crystal Structure of a flavoenzyme RutA in the pyrimidine catabolic pathway
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-03-16 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 87.850, 87.850, 96.368 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.707 - 1.798 |
R-factor | 0.1486 |
Rwork | 0.147 |
R-free | 0.17210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1TVL and 1YW1 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.822 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MrBUMP |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.707 | 1.860 |
High resolution limit [Å] | 1.798 | 1.798 |
Rmerge | 0.083 | 0.369 |
Number of reflections | 39453 | 3198 |
<I/σ(I)> | 19.4 | 3.7 |
Completeness [%] | 97.6 | 80 |
Redundancy | 5.4 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 2 mM FMN, 1.5 M ammonium sulfate, and 100 mM MES pH 6.0 |