5WA5
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor XMD11-50
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-19 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.227, 51.673, 56.955 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.270 - 1.172 |
R-factor | 0.1513 |
Rwork | 0.151 |
R-free | 0.15780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wiv |
RMSD bond length | 0.008 |
RMSD bond angle | 1.361 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.670 | 1.190 |
High resolution limit [Å] | 1.170 | 1.170 |
Rmerge | 0.038 | 0.446 |
Rpim | 0.018 | 0.395 |
Number of reflections | 43365 | 1508 |
<I/σ(I)> | 25.7 | |
Completeness [%] | 97.5 | 70.7 |
Redundancy | 5 | 1.8 |
CC(1/2) | 0.999 | 0.711 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 295 | 100mM Sodium Nitrate, 5% Ethylene Glycol, 18% (w/v) PEG3350 |