5W5S
Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with cyclic peptide CP141019 (P5)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2014-10-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | I 21 3 |
Unit cell lengths | 162.897, 162.897, 162.897 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.536 - 2.284 |
R-factor | 0.1916 |
Rwork | 0.190 |
R-free | 0.22740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ru7 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.065 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.320 |
High resolution limit [Å] | 2.280 | 2.280 |
Rpim | 0.060 | 0.440 |
Number of reflections | 32568 | 1564 |
<I/σ(I)> | 10.8 | 1.5 |
Completeness [%] | 99.7 | 99.1 |
Redundancy | 4.3 | 3.8 |
CC(1/2) | 0.870 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 277.15 | 1M lithium chloride 10% w/v PEG 6000 0.1M sodium citrate, pH= 5.0 |