5W48
Crystal Structure of Riboflavin Lyase (RcaE)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.970, 109.490, 126.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.480 - 1.900 |
R-factor | 0.174 |
Rwork | 0.172 |
R-free | 0.21000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3b9o |
RMSD bond length | 0.006 |
RMSD bond angle | 0.845 |
Data reduction software | iMOSFLM (7.2.1) |
Data scaling software | iMOSFLM (7.2.1) |
Phasing software | PHENIX (1.10.1-2155-000) |
Refinement software | PHENIX (1.10.1-2155-000) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.480 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.200 | 2.965 |
Number of reflections | 82558 | |
<I/σ(I)> | 7.3 | |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 7.7 | 7.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.1 M Bis-Tris-HCl, 1.7 M ammonium sulfate |