5W3B
Crystal structure of mutant CJ YCEI protein (CJ-N182C) with mercuribenzoic acid guest structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2016-12-02 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 179.065, 179.065, 50.648 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.770 - 2.700 |
R-factor | 0.2059 |
Rwork | 0.205 |
R-free | 0.22810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w37 |
RMSD bond length | 0.062 |
RMSD bond angle | 2.013 |
Data reduction software | XDS (20161101) |
Data scaling software | SCALA (3.3.22) |
Phasing software | REFMAC (5.8.0158) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.769 | 38.769 | 2.850 |
High resolution limit [Å] | 2.704 | 8.550 | 2.704 |
Rmerge | 0.041 | 1.201 | |
Rmeas | 0.112 | 0.042 | 1.286 |
Rpim | 0.025 | 0.009 | 0.441 |
Total number of observations | 245372 | ||
Number of reflections | 13431 | ||
<I/σ(I)> | 20.7 | 13.8 | 0.6 |
Completeness [%] | 98.8 | 99 | 92.2 |
Redundancy | 18.3 | 17.9 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 3.2 M ammonium sulfate, 0.1 M Bis-Tris |