5W3A
Crystal structure of mutant CJ YCEI protein (CJ-N182C) with 5-mercapto-2-nitrobenzoic acid guest structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-30 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54187 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 180.329, 180.329, 50.566 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.100 - 2.760 |
R-factor | 0.239 |
Rwork | 0.237 |
R-free | 0.27460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w37 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.770 |
Data reduction software | XDS (20161101) |
Data scaling software | SCALA (3.3.22) |
Phasing software | REFMAC (5.8.0158) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.082 | 45.082 | 2.910 |
High resolution limit [Å] | 2.760 | 8.730 | 2.760 |
Rmerge | 0.053 | 2.370 | |
Rmeas | 0.337 | 0.056 | 2.507 |
Rpim | 0.080 | 0.015 | 0.805 |
Total number of observations | 222910 | ||
Number of reflections | 12968 | ||
<I/σ(I)> | 9 | 12.1 | 0.3 |
Completeness [%] | 100.0 | 99.1 | 100 |
Redundancy | 17.2 | 13.7 | 9.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 3.2 M ammonium sulfate, 0.1 M Bis-Tris |