5W39
Crystal structure of mutant CJ YCEI protein (CJ-N182C) with monobromobimane guest structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2016-12-02 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 178.242, 178.242, 50.599 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.591 - 2.480 |
R-factor | 0.2189 |
Rwork | 0.217 |
R-free | 0.24480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w37 |
RMSD bond length | 0.015 |
RMSD bond angle | 2.013 |
Data reduction software | XDS (20161101) |
Data scaling software | SCALA (3.3.22) |
Phasing software | REFMAC (5.8.0158) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.591 | 38.591 | 2.610 |
High resolution limit [Å] | 2.480 | 7.840 | 2.480 |
Rmerge | 0.029 | 2.633 | |
Rmeas | 0.129 | 0.030 | 2.731 |
Rpim | 0.029 | 0.007 | 0.711 |
Total number of observations | 339182 | ||
Number of reflections | 17262 | ||
<I/σ(I)> | 22.4 | 16.6 | 0.3 |
Completeness [%] | 99.6 | 99 | 97.7 |
Redundancy | 19.6 | 18.2 | 14.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 3.2 M ammonium sulfate, 0.1 M Bis-Tris |