5W15
Crystal structure of an alpha/beta hydrolase fold protein from Burkholderia ambifaria.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-22 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.070, 143.590, 75.850 |
Unit cell angles | 90.00, 111.34, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.750 |
R-factor | 0.1662 |
Rwork | 0.166 |
R-free | 0.18780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k2a |
RMSD bond length | 0.006 |
RMSD bond angle | 0.876 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.750 | 7.830 | 1.750 |
Rmerge | 0.068 | 0.031 | 0.565 |
Rmeas | 0.076 | 0.035 | 0.633 |
Number of reflections | 120204 | 1378 | 8866 |
<I/σ(I)> | 14.92 | 35.82 | 2.73 |
Completeness [%] | 99.8 | 98.5 | 99.9 |
Redundancy | 5.082 | 4.902 | 4.933 |
CC(1/2) | 0.998 | 0.998 | 0.835 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 290 | JCGS+ B8 (283558b8): 100 mM Tris-HCl pH 7.0, 200 mM MgCl2, 10% PEG 8000, protein conc. 19. 9mg/mL, cryo 20% ethylene glycol: puck ID vkw3-6 |