5VZQ
Sperm whale myoglobin V68A/I107Y with nitric oxide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-03 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.816, 29.321, 63.923 |
Unit cell angles | 90.00, 105.74, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.790 |
R-factor | 0.1589 |
Rwork | 0.157 |
R-free | 0.20480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2mbw |
RMSD bond length | 0.019 |
RMSD bond angle | 1.999 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.820 |
High resolution limit [Å] | 1.790 | 4.860 | 1.790 |
Rmerge | 0.027 | 0.022 | 0.042 |
Rmeas | 0.033 | 0.027 | 0.054 |
Rpim | 0.018 | 0.016 | 0.033 |
Total number of observations | 35049 | ||
Number of reflections | 11655 | ||
<I/σ(I)> | 49.1 | ||
Completeness [%] | 97.0 | 96.4 | 91.9 |
Redundancy | 3 | 2.6 | 2 |
CC(1/2) | 0.999 | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris-HCl, 1 mM EDTA, pH 7.4 2.56 M Ammonium Sulfate |