5VX8
VP8* of P[6] Human Rotavirus RV3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9774 |
Spacegroup name | P 1 |
Unit cell lengths | 27.790, 43.100, 65.740 |
Unit cell angles | 94.86, 99.40, 90.22 |
Refinement procedure
Resolution | 27.410 - 2.000 |
R-factor | 0.2107 |
Rwork | 0.208 |
R-free | 0.25790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2aen |
RMSD bond length | 0.004 |
RMSD bond angle | 0.694 |
Data reduction software | iMOSFLM (7.0.9) |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.11.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.410 | |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.071 | 0.102 |
Number of reflections | 33614 | |
<I/σ(I)> | 7.8 | |
Completeness [%] | 90.5 | |
Redundancy | 2.1 | |
CC(1/2) | 0.986 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 1.7 M ammonium sulfate, 0.1 M Tris, pH 7.0 |