5VQ2
Crystal structure of human WT-KRAS in complex with GTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-04-05 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97931 |
Spacegroup name | H 3 |
Unit cell lengths | 94.919, 94.919, 120.500 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 67.910 - 1.960 |
R-factor | 0.1991 |
Rwork | 0.197 |
R-free | 0.23110 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.516 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.910 | 28.285 | 2.070 |
High resolution limit [Å] | 1.960 | 6.200 | 1.960 |
Rmerge | 0.048 | 0.724 | |
Rmeas | 0.169 | 0.057 | 0.899 |
Rpim | 0.073 | 0.025 | 0.401 |
Number of reflections | 29024 | ||
<I/σ(I)> | 6.6 | 13.4 | 0.9 |
Completeness [%] | 99.8 | 93.4 | 100 |
Redundancy | 5.3 | 5.2 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 mol/L sodium acetate, 0.1 mol/L Tris pH 8.5, 28% PEG 3,350 |