5VP3
Light-sensitive photoprotein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-04-28 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 65 |
Unit cell lengths | 72.614, 72.614, 81.429 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.177 - 2.151 |
R-factor | 0.1626 |
Rwork | 0.161 |
R-free | 0.20250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bpj |
RMSD bond length | 0.012 |
RMSD bond angle | 1.185 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.710 | 2.220 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.116 | 0.637 |
Rpim | 0.029 | 0.169 |
Number of reflections | 13301 | 1090 |
<I/σ(I)> | 17.8 | 4.1 |
Completeness [%] | 99.5 | 94.5 |
Redundancy | 16.9 | 14.3 |
CC(1/2) | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M Potassium Tiocyanate, 20% (w/v) PEG 3350 |