5VNY
Crystal structure of DM14-3 domain of Lgd
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-19 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9792 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 29.670, 29.670, 139.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.778 - 1.101 |
R-factor | 0.1703 |
Rwork | 0.170 |
R-free | 0.17820 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 0.897 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.130 |
High resolution limit [Å] | 1.100 | 1.100 |
Number of reflections | 46405 | |
<I/σ(I)> | 11.61 | |
Completeness [%] | 96.4 | |
Redundancy | 5.8 | |
CC(1/2) | 0.998 | 0.608 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 30% PEG2000 MME, Tris, pH 8.0 |