5VKO
SPT6 tSH2-RPB1 1468-1500 pT1471, pS1493
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-11-14 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 42.448, 102.102, 115.743 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.453 - 1.800 |
R-factor | 0.1649 |
Rwork | 0.162 |
R-free | 0.19750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3psj |
RMSD bond length | 0.009 |
RMSD bond angle | 1.013 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.7.15) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.453 | 40.000 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.093 | 0.041 | 1.119 |
Rmeas | 0.099 | 0.044 | 1.238 |
Rpim | 0.035 | 0.015 | 0.518 |
Total number of observations | 186789 | ||
Number of reflections | 23766 | ||
<I/σ(I)> | 13 | ||
Completeness [%] | 99.9 | 99.7 | 99 |
Redundancy | 7.9 | 8.5 | 5.2 |
CC(1/2) | 0.999 | 0.641 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 10% iso-Propanol, 0.1 M Na Hepes pH 7.5, 20% PEG 4000 |