5VJ0
Crystal Structure of heme-containing DyP Type Peroxidase from Enterobacter lignolyticus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-06-16 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 75.870, 74.160, 118.640 |
| Unit cell angles | 90.00, 108.17, 90.00 |
Refinement procedure
| Resolution | 43.449 - 1.930 |
| R-factor | 0.1733 |
| Rwork | 0.173 |
| R-free | 0.20100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5de0 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.847 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHENIX |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 43.449 | 43.449 | 1.980 |
| High resolution limit [Å] | 1.930 | 8.630 | 1.930 |
| Rmerge | 0.071 | 0.032 | 0.608 |
| Rmeas | 0.077 | 0.035 | 0.651 |
| Total number of observations | 716348 | ||
| Number of reflections | 92368 | 1115 | 6739 |
| <I/σ(I)> | 19.45 | 53.1 | 3.83 |
| Completeness [%] | 98.0 | 98.3 | 96.9 |
| Redundancy | 7.755 | 7.114 | 7.838 |
| CC(1/2) | 0.999 | 0.998 | 0.918 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 293 | 0.1M HEPES, pH 7.3, 25% (v/v) PEG-3350 |






