5VEG
Structure of a Short-Chain Flavodoxin Associated with a Non-Canonical PDU Bacterial Microcompartment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0004 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.301, 95.807, 102.378 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.904 - 1.990 |
R-factor | 0.2038 |
Rwork | 0.201 |
R-free | 0.24970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ljl |
RMSD bond length | 0.007 |
RMSD bond angle | 0.804 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2650: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 2.040 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.091 | 0.903 |
Number of reflections | 32751 | 2263 |
<I/σ(I)> | 16.3 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.4 | 10.3 |
CC(1/2) | 0.999 | 0.790 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 25% PEG3350, 200 mM calcium acetate, 100 mM MES, pH 5.5, 6 mM cadmium acetate |