5VBM
Crystal Structure of Small Molecule Disulfide 2C07 Bound to K-Ras Cys Light M72C GDP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.2 |
| Synchrotron site | ALS |
| Beamline | 8.2.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-08-29 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 32.600, 41.180, 111.100 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 55.550 - 1.490 |
| R-factor | 0.1735 |
| Rwork | 0.172 |
| R-free | 0.19620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4lyj |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.105 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless (0.3.8) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 55.550 | 1.510 |
| High resolution limit [Å] | 1.490 | 1.490 |
| Rmerge | 0.053 | 0.255 |
| Rmeas | 0.062 | 0.306 |
| Rpim | 0.032 | 0.166 |
| Number of reflections | 25082 | 1077 |
| <I/σ(I)> | 15.7 | |
| Completeness [%] | 98.7 | 91.8 |
| Redundancy | 3.7 | 2.9 |
| CC(1/2) | 0.998 | 0.932 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 298 | 33% PEG4000 .1 M Na Citrate (pH 4.6) .2 M Ammonium Acetate .22 M KCl (10% Additive of 2.2 M KCL) |






