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5VAB

Crystal structure of ATXR5 PHD domain in complex with histone H3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-D
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2015-01-15
DetectorRIGAKU RAXIS IV
Wavelength(s)1.13
Spacegroup nameP 43 2 2
Unit cell lengths44.010, 44.010, 71.948
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.536 - 1.702
R-factor0.1504
Rwork0.149
R-free0.17860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4qf3
RMSD bond length0.005
RMSD bond angle1.020
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 Overall
Low resolution limit [Å]30.000
High resolution limit [Å]1.700
Number of reflections8225
<I/σ(I)>71.92
Completeness [%]99.5
Redundancy25.59
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1M Hepes (pH 6.5), 10% PEG 6000 and 5% (+/-)-2-methyl-2,4-pentanediol. SET : 50% polypropylene glycol 400, 5% DMSO, 0.1 M HEPES-NaOH (pH 6.0)

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