5VAB
Crystal structure of ATXR5 PHD domain in complex with histone H3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-D |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-01-15 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.13 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 44.010, 44.010, 71.948 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.536 - 1.702 |
R-factor | 0.1504 |
Rwork | 0.149 |
R-free | 0.17860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4qf3 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.020 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 30.000 |
High resolution limit [Å] | 1.700 |
Number of reflections | 8225 |
<I/σ(I)> | 71.92 |
Completeness [%] | 99.5 |
Redundancy | 25.59 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1M Hepes (pH 6.5), 10% PEG 6000 and 5% (+/-)-2-methyl-2,4-pentanediol. SET : 50% polypropylene glycol 400, 5% DMSO, 0.1 M HEPES-NaOH (pH 6.0) |