5V3Z
Crystal Structure of the D1607N mutant form of Thioesterase domain of Mtb Pks13
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-03-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 88.704, 108.904, 58.057 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.364 - 1.881 |
R-factor | 0.1897 |
Rwork | 0.188 |
R-free | 0.22970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v3w |
RMSD bond length | 0.011 |
RMSD bond angle | 1.254 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.910 |
High resolution limit [Å] | 1.880 | 5.100 | 1.880 |
Rmerge | 0.126 | 0.037 | |
Rmeas | 0.134 | 0.041 | |
Rpim | 0.070 | 0.018 | 0.976 |
Number of reflections | 43322 | ||
<I/σ(I)> | 4.6 | ||
Completeness [%] | 93.2 | 99.4 | 59.1 |
Redundancy | 4.9 | 4.9 | 2.6 |
CC(1/2) | 0.998 | 0.221 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | 0.1 M HEPES, 2%-4% v/v PEG400, 1.8-2 M ammonium sulfate |