5UV6
Crystal structure of human Opioid Binding Protein/Cell Adhesion Molecule Like (OPCML)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-01 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.97931 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 93.564, 93.564, 262.158 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.443 - 2.650 |
R-factor | 0.284949700167 |
Rwork | 0.284 |
R-free | 0.30028 |
Structure solution method | SIRAS |
RMSD bond length | 0.006 |
RMSD bond angle | 0.882 |
Data reduction software | iMOSFLM (7.2.1) |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHENIX (1.11.1_2575) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.500 | 2.744 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.170 | 2.740 |
Rpim | 0.047 | 0.740 |
Number of reflections | 34665 | 3401 |
<I/σ(I)> | 9.71 | 1.2 |
Completeness [%] | 95.8 | 88.8 |
Redundancy | 14.4 | 14.5 |
CC(1/2) | 0.996 | 0.685 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | A 50/50 (v/v) mix of 1.6 M MgSO4, 0.1 M MES pH 6.5 with 20% PEG 8000, 100 mM HEPES pH 7.5. |