5UQM
Clostridium difficile Toxin B (TcdB) glucosyltransferase domain in complex with U2F
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-23 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97856 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 61.910, 61.910, 325.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.279 - 2.030 |
R-factor | 0.1981 |
Rwork | 0.197 |
R-free | 0.22780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bvl |
RMSD bond length | 0.014 |
RMSD bond angle | 1.264 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 53.790 |
High resolution limit [Å] | 2.030 |
Rmerge | 0.073 |
Number of reflections | 42362 |
<I/σ(I)> | 23.8 |
Completeness [%] | 99.6 |
Redundancy | 11.3 |
CC(1/2) | 0.848 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 294 | 0.1 M MES, 0.2 ammonium sulfate, PEG 8k 16-34% |