5UE6
Structure of nitrite reductase AniA from Neisseria gonorrhoeae, space group I4122
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-08-18 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.0000 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 177.340, 177.340, 449.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 83.684 - 2.350 |
R-factor | 0.2374 |
Rwork | 0.236 |
R-free | 0.25880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tb7 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.638 |
Data reduction software | XDS (VERSION May 1, 2016 BUILT=20160617) |
Data scaling software | XSCALE (VERSION May 1, 2016 BUILT=20160617) |
Phasing software | PHASER (2.6.1) |
Refinement software | PHENIX ((dev_2481)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 83.684 | 83.684 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.179 | 0.041 | 1.050 |
Rmeas | 0.205 | 0.048 | 1.211 |
Total number of observations | 522213 | ||
Number of reflections | 125421 | 1389 | 9020 |
<I/σ(I)> | 5.81 | 15.86 | 1.77 |
Completeness [%] | 84.8 | 74.5 | 83.3 |
Redundancy | 4.164 | 4.112 | 3.912 |
CC(1/2) | 0.990 | 0.996 | 0.754 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 0.2M sodium thiocyanate, 20% PEG3350 |