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5UDQ

LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2016-06-19
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.9787
Spacegroup nameP 41 2 2
Unit cell lengths107.401, 107.401, 317.042
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.489 - 2.090
R-factor0.1888
Rwork0.187
R-free0.23100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.874
Data reduction softwareXDS
Data scaling softwareAimless (0.5.25)
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX (1.11.1-2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.03048.0302.120
High resolution limit [Å]2.09011.4302.090
Rmerge0.0760.0370.576
Number of reflections110015
<I/σ(I)>15.6
Completeness [%]99.386.194.9
Redundancy6.34.85.4
CC(1/2)0.9970.9950.702
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5294.154 ul ~39 mg/ml LarE (100 mM Tris-HCl pH 7.5, 300 mM NaCl) mixed with 4 ul reservoir solution. Hanging drop reservoir contained 100 ul of 37.5% v/v pentaerythritol ethoxylate (15/4 EO/OH), 50 mM BIS-TRIS pH 6.5, 105 mM ammonium sulfate.

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PDB entries from 2024-05-15

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