Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UBI

Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound PRPP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]80
Detector technologyCCD
Collection date2014-05-04
DetectorADSC QUANTUM 210r
Wavelength(s)0.959
Spacegroup nameP 21 21 21
Unit cell lengths66.003, 79.690, 91.119
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.560 - 2.140
R-factor0.2131
Rwork0.209
R-free0.28334
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)single chain of 5UB9
RMSD bond length0.012
RMSD bond angle1.504
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.160
High resolution limit [Å]2.1002.100
Rmerge0.0960.800
Number of reflections28897
<I/σ(I)>27.33.7
Completeness [%]99.998.5
Redundancy14.614.4
CC(1/2)0.9990.896
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5293.150.1 M sodium acetate pH 5.0, 0.01 M ZnCl2, 7-10% PEG 6000 formed crystals were soaked with 3 mM PRPP for 30-60 min

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon