5U8E
Crystal Structure of substrate-free arginine kinase from spider Polybetes pythagoricus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | BRUKER IMUS MICROFOCUS |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-27 |
Detector | BRUKER PHOTON 100 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.131, 61.117, 60.991 |
Unit cell angles | 90.00, 95.86, 90.00 |
Refinement procedure
Resolution | 20.307 - 2.180 |
R-factor | 0.1752 |
Rwork | 0.172 |
R-free | 0.22640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4am1 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.852 |
Data reduction software | PROTEUM PLUS (v2) |
Data scaling software | PROTEUM PLUS (V2) |
Phasing software | PHASER (2.1.2) |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.300 | 2.250 |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.048 | 0.284 |
Number of reflections | 18342 | |
<I/σ(I)> | 24.7 | 3.34 |
Completeness [%] | 99.4 | 94.27 |
Redundancy | 6.8 | 4.3 |
CC(1/2) | 0.980 | 0.739 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 289 | 0.2 M ammonium acetate, 0.1 M sodium citrate tribasic dihydrate pH 5.6 and 30% w/v polyethylene glycol 4000. |