5U43
Human PPARdelta ligand-binding domain in complexed with specific agonist 12
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-1 |
| Synchrotron site | SSRL |
| Beamline | BL9-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2006-11-25 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 39.640, 95.010, 96.320 |
| Unit cell angles | 90.00, 97.60, 90.00 |
Refinement procedure
| Resolution | 35.406 - 1.900 |
| R-factor | 0.188 |
| Rwork | 0.186 |
| R-free | 0.23840 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1gwz |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.240 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.740 | 1.830 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Number of reflections | 64330 | |
| <I/σ(I)> | 40.9 | |
| Completeness [%] | 98.3 | 79.9 |
| Redundancy | 3.5 | 1.6 |
| CC(1/2) | 0.992 | 0.662 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277.15 | Bis-tris propane, potassium chloride, PEG 8000, 1,2-propandiol, EDTA, DTT |
