5U41
Human PPARdelta ligand-binding domain in complexed with specific agonist 16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.449, 95.124, 95.795 |
Unit cell angles | 90.00, 96.44, 90.00 |
Refinement procedure
Resolution | 47.595 - 1.900 |
R-factor | 0.2117 |
Rwork | 0.210 |
R-free | 0.26890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gwz |
RMSD bond length | 0.006 |
RMSD bond angle | 0.720 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 95.130 | 1.930 |
High resolution limit [Å] | 1.570 | 1.900 |
Number of reflections | 47329 | |
<I/σ(I)> | 10.7 | 0.8 |
Completeness [%] | 85.5 | 35.9 |
Redundancy | 3.2 | 1.6 |
CC(1/2) | 0.984 | 0.547 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277.15 | Bis-tris propane, potassium chloride, PEG 8000, 1,2-propandiol, EDTA, DTT |