Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5U41

Human PPARdelta ligand-binding domain in complexed with specific agonist 16

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2006-04-14
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths39.449, 95.124, 95.795
Unit cell angles90.00, 96.44, 90.00
Refinement procedure
Resolution47.595 - 1.900
R-factor0.2117
Rwork0.210
R-free0.26890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1gwz
RMSD bond length0.006
RMSD bond angle0.720
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]95.1301.930
High resolution limit [Å]1.5701.900
Number of reflections47329
<I/σ(I)>10.70.8
Completeness [%]85.535.9
Redundancy3.21.6
CC(1/2)0.9840.547
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5277.15Bis-tris propane, potassium chloride, PEG 8000, 1,2-propandiol, EDTA, DTT

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon