5U3K
Crystal Structure of DH511.2 Fab in Complex with HIV-1 gp41 MPER 662-683 Peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-01 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 109.396, 75.756, 122.630 |
Unit cell angles | 90.00, 94.29, 90.00 |
Refinement procedure
Resolution | 40.762 - 2.637 |
R-factor | 0.2344 |
Rwork | 0.232 |
R-free | 0.28340 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.520 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.762 | 50.000 | 2.740 |
High resolution limit [Å] | 2.650 | 5.710 | 2.650 |
Rmerge | 0.109 | 0.050 | 0.516 |
Rmeas | 0.152 | ||
Rpim | 0.106 | ||
Total number of observations | 49360 | ||
Number of reflections | 28726 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 96.9 | 90.8 | 97.9 |
Redundancy | 1.7 | 1.8 | 1.7 |
CC(1/2) | 0.992 | 0.596 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 30% PEG 1500, 10% Isopropanol, 0.1 M CaCl2, 0.1 M Imidazole pH 6.5 |